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Release: Showing tree for 3.23

AnnotationData(938)

ChipManufacturer(404)

AffymetrixChip(342)

AgilentChip(17)

ClonetechChip(0)

CodelinkChip(12)

IlluminaChip(29)

UniversityHealthNetwork(0)

JazaerimetaData(0)

OperonHumanV3(1)

PartheenMetaData(1)

Roberts2005Annotation(1)

ag(3)

hs25kresogen(1)

illuminaHumanv1(1)

illuminaHumanv2(1)

illuminaMousev1(1)

illuminaMousev1p1(1)

illuminaRatv1(1)

mm24kresogen(1)

pedbarrayv10(1)

xenopuslaevis(2)

MBNICustomCDF(0)

CustomDBSchema(10)

GeneCardsCustomSchema(0)

FunctionalAnnotation(30)

Anopheles_gambiae(4)

Apis_mellifera(4)

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AnnotationHub(43)

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cdf(118)

db0(19)

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Anopheles_gambiae_Data(0)

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Homo_sapiens_Data(123)

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Magnaporthe_grisea_Data(0)

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Mus_musculus_Data(31)

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Oncorhynchus_mykiss_Data(0)

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Software(2,618)

AssayDomain(970)

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CopyNumberVariation(66)

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GeneExpression(643)

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SNP(90)

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NetworkInference(62)

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PeakDetection(24)

QuantitativeTrailLocus(0)

SequenceMatching(55)

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GPU(1)

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Proteomics(193)

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SystemsBiology(100)

Transcriptomics(298)

StatisticalMethod(884)

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Clustering(296)

DecisionTree(8)

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FeatureExtraction(68)

GraphAndNetwork(131)

HiddenMarkovModel(16)

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NeuralNetwork(5)

PatternLogic(3)

PrincipalComponent(59)

Regression(156)

StructuralEquationModels(1)

SupportVectorMachine(11)

Technology(1,611)

AnnotationHubSoftware(5)

ExperimentHubSoftware(11)

FlowCytometry(72)

MassSpectrometry(154)

ImagingMassSpectrometry(3)

Microarray(399)

GenotypingArray(2)

MethylationArray(46)

MicroRNAArray(5)

MultiChannel(7)

ProprietaryPlatforms(11)

ReversePhaseProteinArray(0)

TissueMicroarray(2)

mRNAMicroarray(24)

MicrotitrePlateAssay(14)

Sequencing(938)

DenovoGenome(0)

DenovoTranscriptome(0)

HiC(36)

MicrobialStrain(1)

PooledScreens(6)

TargetedResequencing(6)

WholeGenome(40)

SingleCell(346)

qPCR(13)

WorkflowManagement(1)

WorkflowStep(1,321)

MultipleSequenceAlignment(19)

Annotation(152)

BatchEffect(76)

ExperimentalDesign(34)

GenomeBrowsers(2)

MultipleComparison(184)

Normalization(188)

GO(76)

KEGG(55)

NCINatureCurated(0)

Preprocessing(276)

QualityControl(245)

ReportWriting(39)

Visualization(614)

AnnotationWorkflow(4)

BasicWorkflow(5)

DifferentialSplicingWorkflow(0)

EpigeneticsWorkflow(6)

GeneExpressionWorkflow(13)

GenomicVariantsWorkflow(0)

ImmunoOncologyWorkflow(20)

ProteomicsWorkflow(1)

ResourceQueryingWorkflow(2)

SingleCellWorkflow(10)

SpatialWorkflow(1)

AnnotationWorkflow

4 packages

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Package	Category	Version	Status
CAGEWorkflowBioc A step-by-step guide to analyzing CAGE data using R/Bioconductor	workflows	1.28.0	current
annotationBioc Genomic Annotation Resources	workflows	1.36.0	current
seqpacBioc Seqpac: A Framework for smallRNA analysis in R using Sequence-Based Counts	workflows	1.12.0	current
variantsBioc Annotating Genomic Variants	workflows	1.36.0	current