Bioconductor Topics

A subset of arrays from a large acute lymphoblastic leukemia (ALL) study

Example dataset for normalization of Illumina 450k Methylation data

Attribute-Weighted Aggregation Data

Affymetrix Data Files (CEL, CDF, CHP, EXP, PGF, PSI) for Testing

Example of Amplified Data

Data and Files for the AssessORF Package

Analysing Illumina BeadArray expression data using Bioconductor

Illumina EPIC data on BeadSorted child saliva cells

R-side access to BioPlex protein-protein interaction data

Carbon Tetrachloride (CCl4) treated hepatocytes

Hub package for the precomputed data of CENTRE and example data

A Package for CLL Gene Expression Data

Annotations for City of Hope CpG Island Analysis Pipeline

Datasets and workflows for the Cardinal MSI

Pre-processed data for use with the CellMapper package

ChIP-seq Target Databases for TFEA.ChIP

Chimp and human brain data package

Data for the CluMSID package

VST normalized RNA-Sequencing data with annotations for multiple species samples from Bgee

Functional connections between drugs, genes and diseases as revealed by common gene-expression changes

DNA methylation-based machine learning models

Data accompanying the DAPAR and Prostar packages

Data package for DExMA package

Diffuse large B-cell lymphoma expression data

Data Package for DMRcate

Example DNAm Data for DMRsegal

DNA Zoo data package

Poor prognosis colon cancer is defined by a molecularly distinct subtype and precursor lesion

Orchestrating Blood Radiation Transcriptomic Data

Test Files for Single-Cell Droplet Utilities

Drug versus Disease Data

Data, Clustering Results and Visualization Functions From Duò et al (2018)

Data for the ELMER package

Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)

ChIP-seq data of ORC-binding sites in Yeast excerpted from Eaton et al. 2010

Data for the EpiMix package

EpipwR.data: Reference data for EpipwR

Download datasets from EMBL-EBI Expression Atlas

Tumor, tumor-adjacent normal, and healthy colorectal transcriptomes as SummarizedExperiment objects

Gene expression data from breast cancer cells under FGFR2 signalling perturbation

Master regulators of FGFR2 signalling and breast cancer risk

Illumina HumanMethylation data on sorted blood cell populations

Illumina EPIC data on immunomagnetic sorted peripheral adult blood cells

Illumina 450k data on sorted cord blood cells

Illumina 450k/EPIC data on FACS and MACS umbilical blood cells

Illumina HumanMethylation data on sorted cord blood cell populations

Illumina HumanMethylation data on sorted frontal cortex cell populations

Gene Set Benchmark

GEO accession data GSE103322 as a SingleCellExperiment

Placental cell DNA methylation data from GEO accession GSE159526