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Browse 499 topics across software, annotation, experiment, and workflow packages.

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Release: Showing tree for 3.23

AnnotationData(938)

ChipManufacturer(404)

AffymetrixChip(342)

AgilentChip(17)

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CodelinkChip(12)

IlluminaChip(29)

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ag(3)

hs25kresogen(1)

illuminaHumanv1(1)

illuminaHumanv2(1)

illuminaMousev1(1)

illuminaMousev1p1(1)

illuminaRatv1(1)

mm24kresogen(1)

pedbarrayv10(1)

xenopuslaevis(2)

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Microarray(399)

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MicroRNAArray(5)

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TissueMicroarray(2)

mRNAMicroarray(24)

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Sequencing(938)

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HiC(36)

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WholeGenome(40)

SingleCell(346)

qPCR(13)

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WorkflowStep(1,321)

MultipleSequenceAlignment(19)

Annotation(152)

BatchEffect(76)

ExperimentalDesign(34)

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MultipleComparison(184)

Normalization(188)

GO(76)

KEGG(55)

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Preprocessing(276)

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Visualization(614)

AnnotationWorkflow(4)

BasicWorkflow(5)

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EpigeneticsWorkflow(6)

GeneExpressionWorkflow(13)

GenomicVariantsWorkflow(0)

ImmunoOncologyWorkflow(20)

ProteomicsWorkflow(1)

ResourceQueryingWorkflow(2)

SingleCellWorkflow(10)

SpatialWorkflow(1)

TranscriptomeVariant

6 packages

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Package	Category	Version	Status
IsoformSwitchAnalyzeRBioc Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data	software	2.12.0	current
RIVERBioc R package for RIVER (RNA-Informed Variant Effect on Regulation)	software	1.36.0	current
SplicingFactoryBioc Splicing Diversity Analysis for Transcriptome Data	software	1.20.0	current
airpartBioc Differential cell-type-specific allelic imbalance	software	1.20.0	current
pfamAnalyzeRBioc Identification of domain isotypes in pfam data	software	1.12.0	current
transmogRBioc Modify a set of reference sequences using a set of variants	software	1.8.1	current