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FLAMES

Bioc current

FLAMES: Full Length Analysis of Mutations and Splicing in long read RNA-seq data

v2.6.0 · software · GPL (>= 3)
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Release Lineage

Entered 3.14 · Oct 27, 2021

Current · Requires R 4.6

1.0 In 10 of 49 releases 3.23

Description

Semi-supervised isoform detection and annotation from both bulk and single-cell long read RNA-seq data. Flames provides automated pipelines for analysing isoforms, as well as intermediate functions for manual execution.

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Topics

Software › Technology › Sequencing › RNASeq
Software › Technology › SingleCell
Software › ResearchField › Transcriptomics
Software › Infrastructure › DataImport
Software › BiologicalQuestion › DifferentialSplicing
Software › BiologicalQuestion › AlternativeSplicing
Software › AssayDomain › GeneExpression
Software › Technology › Sequencing › LongRead

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