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Legacy Utilities for Single-Cell RNA-Seq Analysis

v1.22.0 · software · GPL-3
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Release Lineage

Entered 3.12 · Oct 28, 2020

Current · Requires R 4.6

1.0 In 12 of 49 releases 3.23

Description

Provides some legacy utility functions for performing single-cell analyses. Most of these functions are deprecated in favor of newer, more performant alternatives. We just keep this package around for back-compatibility and to point to the replacement functions.

Code & tests

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Code

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Topics

Software › ResearchField › Immunology › ImmunoOncology
Software › Technology › SingleCell
Software › Technology › Sequencing › RNASeq
Software › WorkflowStep › QualityControl
Software › WorkflowStep › Preprocessing
Software › WorkflowStep › Normalization
Software › ResearchField › Transcriptomics
Software › AssayDomain › GeneExpression
Software › Technology › Sequencing
Software
Software › Infrastructure › DataImport

Depended on by (76)

Bioconductor (72)

Banksy BASiCS BASiCStan batchelor bluster chevreulPlot chevreulProcess ClusterGVis CSOA DESpace dreamlet DropletUtils epiregulon epiregulon.extra escheR FLAMES ggsc GSABenchmark hammers iSEEde iSEEfier iSEEpathways mastR mia miaDash miloR mumosa muscat omicsGMF raer +42 more

CRAN (4)

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