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miloR

Bioc current

Differential neighbourhood abundance testing on a graph

v2.8.1 · software · GPL-3 + file LICENSE
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Release Lineage

Entered 3.13 · May 20, 2021

Current · Requires R 4.6

1.0 In 11 of 49 releases 3.23

Description

Milo performs single-cell differential abundance testing. Cell states are modelled as representative neighbourhoods on a nearest neighbour graph. Hypothesis testing is performed using either a negative bionomial generalized linear model or negative binomial generalized linear mixed model.

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Topics

Software › Technology › SingleCell
Software › WorkflowStep › MultipleComparison
Software › ResearchField › FunctionalGenomics
Software

Depended on by (1)

Bioconductor (1)

dandelionR

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