zellkonverter
Bioc currentConversion Between scRNA-seq Objects
Release Lineage
Entered 3.12 · Oct 28, 2020
Current · Requires R 4.6
Description
Provides methods to convert between Python AnnData objects and SingleCellExperiment objects. These are primarily intended for use by downstream Bioconductor packages that wrap Python methods for single-cell data analysis. It also includes functions to read and write H5AD files used for saving AnnData objects to disk.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
48 7 exported
Complexity
4.5 avg / 32 max
Call network
48 nodes / 75 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
4,294
Files
66
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
8
Internal functions
41
Testing & CI
Has tests
Yes
Test-to-code ratio
0.42
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
Yes
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
9.1%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
12
First release
2021-03-08
Latest release
2026-04-28
Avg cadence
168 days
Cold removal rate
100%
Dep drift
2
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 85%
- Return-value docs
- 100%
- References docs
- 0%
Topics
Depended on by (14)
Bioconductor (13)
CRAN (1)
People
- Luke Zappia author maintainer
- Robrecht Cannoodt contributor
- Marek Cmero contributor
- Gabriel Hoffman contributor
- Jack Kamm contributor
- Aaron Lun author