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BgeeDB

Bioc current

Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology

v2.38.1 · software · GPL-3 + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.3 · May 4, 2016

Current · Requires R 4.6

1.0 In 21 of 49 releases 3.23

Description

A package for the annotation and gene expression data download from Bgee database, and TopAnat analysis: GO-like enrichment of anatomical terms, mapped to genes by expression patterns.

Code

Code metrics have not been computed for this package yet.

Topics

Software
Software › Infrastructure › DataImport
Software › Technology › Sequencing
Software › AssayDomain › GeneExpression
Software › Technology › Microarray
Software › WorkflowStep › Pathways › GO
Software › BiologicalQuestion › GeneSetEnrichment

Depended on by (2)

Bioconductor (2)

RITAN psygenet2r

People

Julien Wollbrett