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topGO

Bioc current

Enrichment Analysis for Gene Ontology

v2.64.0 · software · LGPL
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 2.0 · Apr 26, 2007

Current · Requires R 4.6

1.0 In 39 of 49 releases 3.23

Description

topGO package provides tools for testing GO terms while accounting for the topology of the GO graph. Different test statistics and different methods for eliminating local similarities and dependencies between GO terms can be implemented and applied.

Code

Code metrics have not been computed for this package yet.

Topics

Software › AssayDomain › GeneExpression
Software › ResearchField › Transcriptomics
Software › BiologicalQuestion › GeneSetEnrichment
Software › WorkflowStep › Pathways › GO
Software › WorkflowStep › Annotation
Software › WorkflowStep › Pathways
Software › ResearchField › SystemsBiology
Software › Technology › Microarray
Software › Technology › Sequencing
Software › WorkflowStep › Visualization
Software

Depended on by (37)

Bioconductor (37)

APL BgeeDB cellity compEpiTools consICA DeeDeeExperiment EGSEA fenr FGNet GeDi geva GRaNIE ideal IntramiRExploreR miRNAtap moanin mosdef OmaDB pcaExplorer transcriptogramer tRanslatome ViSEAGO ExpHunterSuite maEndToEnd BioMM ccTutorial cellTree EMMA FoldGO GOSim +7 more

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