CuratedAtlasQueryR

Description

Provides access to a copy of the Human Cell Atlas, but with harmonised metadata. This allows for uniform querying across numerous datasets within the Atlas using common fields such as cell type, tissue type, and patient ethnicity. Usage involves first querying the metadata table for cells of interest, and then downloading the corresponding cells into a SingleCellExperiment object.

Code

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Topics

People

• Stefano Mangiola author maintainer rev
• NHMRC 1116955 fnd
• NIH NHGRI 5U24HG004059-18 fnd
• Silicon Valley Foundation CZF2019-002443 fnd
• Vincent Carey contributor rev
• Victoria Cancer Agency ECRF21036 fnd
• Julie Iskander rev
• Michael Milton author rev
• Martin Morgan contributor rev
• Tony Papenfuss rev