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DMRcaller

Bioc current

Differentially Methylated Regions Caller

v1.44.0 · software · GPL-3
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Release Lineage

Entered 3.1 · Apr 17, 2015

Current · Requires R 4.6

1.0 In 23 of 49 releases 3.23

Description

Uses Bisulfite sequencing data in two conditions and identifies differentially methylated regions between the conditions in CG and non-CG context. The input is the CX report files produced by Bismark and the output is a list of DMRs stored as GRanges objects.

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Topics

Software › BiologicalQuestion › DifferentialMethylation
Software › AssayDomain › DNAMethylation
Software
Software › Technology › Sequencing
Software › BiologicalQuestion › Coverage

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