Bioconductor Packages

View AnnotationHub and ExperimentHub Resources Interactively

View Bioconductor Package Maintainer Information Interactively

BioC Workflow about publishing a Bioc Workflow

A step-by-step guide to analyzing CAGE data using R/Bioconductor

"CITEViz: Classifying Cell Clusters in CITE-Seq Data using the Flow Cytometry Gating Workflow"

Peripheral blood CITE-Seq dataset with 10K cells for use with CITEViz tutorial

Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filtering

Genomic coordinates of CTCF binding sites, with orientation

Analysis of single-cell epigenomics datasets with a Shiny App

Helper files for CopywriteR

GUI's for visualization of flow cytometry data analysis pipelines

Graphical Exploration of Design Matrices

GExPipe: Gene Expression Pipeline Shiny Application

Genomics explorer using statistical and survival analysis in R

Gene Set Enrichment Analysis Interactive Explorer

Defining and visualizing the distances between different genesets

Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis

GeoMx Digital Spatial Profiler (DSP) data analysis workflows

LymphoSeq annotation databases

MSstats GUI for Statistical Anaylsis of Proteomics Experiments

Shiny-based interactive data-quality exploration for omics data

Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics data

Motif Identification and Validation

Orchestrating Single Cell Analysis with Bioconductor

Advanced Single-Cell Analysis

Single-Cell Analysis Basics

Introduction to OSCA

OSCA for Multiple Samples

OSCA Workflows

Interactive web application for Omics-data analysis

A phosphoproteomics data analysis package with an interactive ShinyApp

Annotation data for the TENET package

Thermal Shift Analysis in R

Genomic Annotation Resources

Using Bioconductor for Microarray Analysis

A Better Way To Explore What Is Best

Interactive Exploration & Management of RNA-Seq Analyses

Queries the Human Cell Atlas

Visualization Techniques for Clonal Evolution

CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets

Genomic coordinates of problematic genomic regions

Genomic coordinates of problematic genomic regions

Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells

A plyranges and tximeta workflow

Umbrella package for R packages in the gDR suite

Processing functions and interface to process and analyze drug dose-response data

Gene Expression displaYer of SummarizedExperiment in R

Interactive Exploration of GSEA by the GOAT Method

Interactive SummarizedExperiment Explorer

Streamlining the creation of initial states for starting an iSEE instance