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Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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846

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5

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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Showing 1–24 of 24 packages

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Package Status

Metabolites and proteins linked to PathBank pathways (for AnnotationHub)

current

Metabolites linked to WikiPathways pathways (for AnnotationHub)

current

A step-by-step guide to analyzing CAGE data using R/Bioconductor

current
CTCF Bioc

Genomic coordinates of CTCF binding sites, with orientation

current

DrugBank data set

current
CopyhelpeR Bioc

Helper files for CopywriteR

current

A compilation of ENCODE metadata

current

LymphoSeq annotation databases

current
RmiR.hsa Bioc

Various databases of microRNA Targets

current

Annotation data for the TENET package

current
annotation Bioc

Genomic Annotation Resources

current
arrays Bioc

Using Bioconductor for Microarray Analysis

current

Genomic coordinates of problematic genomic regions

current

A plyranges and tximeta workflow

current

Unknown annotation data (chip hguDKFZ31)

current

Unknown annotation data (chip hgubeta7)

current
hpAnnot Bioc

Anotation package for Hipathia package

current
liftOver Bioc

Changing genomic coordinate systems with rtracklayer::liftOver

current

Mapping of Metabolite IDs from Different Sources

current
seqpac Bioc

Seqpac: A Framework for smallRNA analysis in R using Sequence-Based Counts

current
sequencing Bioc

Introduction to Bioconductor for Sequence Data

current

AnnotationData for Synaptome.DB package

current

Synamptosome Proteome Database

current
variants Bioc

Annotating Genomic Variants

current