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scDblFinder

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scDblFinder

v1.26.7 · software · GPL-3 + file LICENSE
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Release Lineage

Entered 3.10 · Oct 30, 2019

Current · Requires R 4.6

1.0 In 14 of 49 releases 3.23

Description

The scDblFinder package gathers various methods for the detection and handling of doublets/multiplets in single-cell sequencing data (i.e. multiple cells captured within the same droplet or reaction volume). It includes methods formerly found in the scran package, the new fast and comprehensive scDblFinder method, and a reimplementation of the Amulet detection method for single-cell ATAC-seq.

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Topics

Software › WorkflowStep › Preprocessing
Software › Technology › SingleCell
Software › Technology › Sequencing › RNASeq
Software › Technology › Sequencing › ATACSeq

Depended on by (4)

Bioconductor (4)

DOtools singleCellTK OSCA.advanced scBatchQC

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