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ribosomeProfilingQC

Bioc current

Ribosome Profiling Quality Control

v1.24.0 · software · GPL (>=3) + file LICENSE
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Release Lineage

Entered 3.11 · Apr 28, 2020

Current · Requires R 4.6

1.0 In 13 of 49 releases 3.23

Description

Ribo-Seq (also named ribosome profiling or footprinting) measures translatome (unlike RNA-Seq, which sequences the transcriptome) by direct quantification of the ribosome-protected fragments (RPFs). This package provides the tools for quality assessment of ribosome profiling. In addition, it can preprocess Ribo-Seq data for subsequent differential analysis.

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Topics

Software › Technology › Sequencing › RiboSeq
Software › Technology › Sequencing
Software › BiologicalQuestion › GeneRegulation
Software › WorkflowStep › QualityControl
Software › WorkflowStep › Visualization
Software › BiologicalQuestion › Coverage

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