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regionReport

Bioc current

Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results

v1.46.0 · software · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.0 · Oct 14, 2014

Current · Requires R 4.6

1.0 In 24 of 49 releases 3.23

Description

Generate HTML or PDF reports to explore a set of regions such as the results from annotation-agnostic expression analysis of RNA-seq data at base-pair resolution performed by derfinder. You can also create reports for DESeq2 or edgeR results.

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Topics

Software › BiologicalQuestion › DifferentialExpression
Software › Technology › Sequencing
Software › Technology › Sequencing › RNASeq
Software
Software › WorkflowStep › Visualization
Software › AssayDomain › Transcription
Software › BiologicalQuestion › Coverage
Software › WorkflowStep › ReportWriting
Software › BiologicalQuestion › DifferentialMethylation
Software › BiologicalQuestion › DifferentialPeakCalling
Software › ResearchField › Immunology › ImmunoOncology
Software › WorkflowStep › QualityControl

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