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HarmanData

Bioc current

Data for the Harman package

v1.40.0 · experiment · GPL-3
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Release Lineage

Entered 3.3 · May 4, 2016

Current · Requires R 4.6

1.0 In 21 of 49 releases 3.23

Description

Datasets of accompany Harman, a PCA and constrained optimisation based technique. Contains three example datasets: IMR90, Human lung fibroblast cells exposed to nitric oxide; NPM, an experiment to test skin penetration of metal oxide nanoparticles following topical application of sunscreens in non-pregnant mice; OLF; an experiment to gauge the response of human olfactory neurosphere-derived (hONS) cells to ZnO nanoparticles. Since version 1.24, this package also contains the Infinium5 dataset, a set of batch correction adjustments across 5 Illumina Infinium Methylation BeadChip datasets. This file does not contain methylation data, but summary statistics of 5 datasets after correction. There is also an EpiSCOPE_sample file as exampling for the new methylation clustering functionality in Harman.

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Topics

ExperimentData › AssayDomainData › ExpressionData
ExperimentData › TechnologyData › MicroarrayData
ExperimentData
ExperimentData › OrganismData › Homo_sapiens_Data
ExperimentData › OrganismData › Mus_musculus_Data

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Bioconductor (1)

Harman

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