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Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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846

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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Showing 1–31 of 31 packages

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Package Status

Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Expression Data Package

current

ChIPXpress Pre-built Databases

current
CoSIAdata Bioc

VST normalized RNA-Sequencing data with annotations for multiple species samples from Bgee

current

Data Package for DMRcate

current
EGSEAdata Bioc

Gene set collections for the EGSEA package

current
HarmanData Bioc

Data for the Harman package

current

M3Drop Example Data

current

Example ChIP-Seq data for the MMDiff package

current

Example {M}ouse {U}niversal {G}enotyping {A}rray data for genome reconstruction and quantitative trait locus mapping.

current

Collection of public MERFISH datasets

current

Collection of Public DNA Methylation Sequencing Datasets

current

Multi-omics data access for studies investigating the effects of aging

current

Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

current

Experimental Data for MutSeqR Examples

current
PCHiCdata Bioc

Promoter Capture Hi-C data

current

M. musculus background for PWMEnrich

current

Bin annotation mm10

current
SFEData Bioc

Example SpatialFeatureExperiment datasets

current

Collection of spatial transcriptomics datasets in SpatialExperiment Bioconductor format

current

Collection of spatial omics datasets

current

Annotated spatial transcriptomics datasets from 10x Xenium, NanoString CosMx and BGI STOmics.

current

Visium spatial gene expression data by 10X Genomics

current
dorothea Bioc

Collection Of Human And Mouse TF Regulons

current

mouse4302 data for barcode

current
msigdb Bioc

An ExperimentHub Package for the Molecular Signatures Database (MSigDB)

current
multiMiR Bioc

Integration of multiple microRNA-target databases with their disease and drug associations

current

Data Package for multiWGCNA

current
pRolocdata Bioc

Data accompanying the pRoloc package

current

miRNA Affinity models for the scanMiR package

current

Provides access to smokingMouse project data

current
tissueTreg Bioc

TWGBS and RNA-seq data from tissue T regulatory cells from mice

current