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GenomicInteractions

Bioc current

Utilities for handling genomic interaction data

v1.46.0 · software · GPL-3
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.0 · Oct 14, 2014

Current · Requires R 4.6

1.0 In 24 of 49 releases 3.23

Description

Utilities for handling genomic interaction data such as ChIA-PET or Hi-C, annotating genomic features with interaction information, and producing plots and summary statistics.

Code & tests

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Code

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Topics

Software
Software › Infrastructure
Software › Infrastructure › DataImport
Software › Infrastructure › DataRepresentation
Software › Technology › Sequencing › HiC

Depended on by (13)

Bioconductor (11)

CAGEfightR Chicago ELMER extraChIPs GOaGO HiCaptuRe HiCDCPlus sevenC linkSet spatzie OHCA

CRAN (2)

CNVScope chicane

People

Liz Ing-Simmons