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CiteFuse

Bioc current

CiteFuse: multi-modal analysis of CITE-seq data

v1.24.0 · software · GPL-3
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Release Lineage

Entered 3.11 · Apr 28, 2020

Current · Requires R 4.6

1.0 In 13 of 49 releases 3.23

Description

CiteFuse pacakage implements a suite of methods and tools for CITE-seq data from pre-processing to integrative analytics, including doublet detection, network-based modality integration, cell type clustering, differential RNA and protein expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualisation of the analyses.

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Topics

Software › Technology › SingleCell
Software › AssayDomain › GeneExpression

Depended on by (1)

Bioconductor (1)

MuData

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