Bioconductor Packages

Averaged gene expression in human brain regions from Allen Brain Atlas

CytoBands for AnnotationHub

EnsDbs for AnnotationHub

AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype

Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account

A subset of arrays from a large acute lymphoblastic leukemia (ALL) study

Affinity Network Fusion for Complex Patient Clustering

Analysis of alternative poly A site usage

A toolkit for APA analysis using RNA-seq data

Association Plots

Example dataset for normalization of Illumina 450k Methylation data

Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models

Automatic Statistical Identification in Complex Spectra

An R package for subset-based association analysis of heterogeneous traits and subtypes

Adaptive Signature Selection and InteGratioN (ASSIGN)

Functional annotation-driven unsupervised clustering for single-cell data

ASpedia-FI: Functional Interaction Analysis of Alternative Splicing Events

Analysis of Alternative Splicing Using RNA-Seq

Analysis Tools for scATACseq Data with CoGAPS

Attribute-Weighted Aggregation

Attribute-Weighted Aggregation Data

An R package for fast computing for adaptively weighted fisher's method

A Functional Approach To Impute Genetically Regulated Expression

Affymetrix GeneChip software compatibility

Affymetrix Human Genome U133A 2.0 Array (GPL571) Expression Data Package

Affyhgu133Plus2Expr (GPL570) Expression Data Package

Affymetrix Human hgu133a Array (GPL96) Expression Data Package

Affymetrix Data Files (CEL, CDF, CHP, EXP, PGF, PSI) for Testing

Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Expression Data Package

Investigates Allele Specific Expression

Automated spectraL Processing System for NMR

Create an ALTREP object by defining ALTREP functions in R

Example of Amplified Data

Bioconductor on the AnVIL compute environment

R / Bioconductor Support for the AnVIL Azure Platform

Generic functions for interacting with the AnVIL ecosystem

Provide functions to retrieve and report on usage expenses in NHGRI AnVIL (anvilproject.org).

The GCP R Client for the AnVIL

Publish Packages and Other Resources to AnVIL Workspaces

Expose the vrs_anvil_toolkit Python package via R

Run workflows implemented in Terra/AnVIL workspace

A framework for sharing interactive data and plots from R through the web

Analysis of Copy Number Variation in Single-Cell-Sequencing Data

WGSCS Data for Demonstration Purposes

100+ Curated Breast Cancer Gene Expression Data sets

Facilities for Filtering Bioconductor Annotation Resources

Tools for building SQLite-based annotation data packages

Client to access AnnotationHub resources

Transform public data resources into Bioconductor Data Structures

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet