Skip to content

ANF

Bioc current

Affinity Network Fusion for Complex Patient Clustering

v1.34.0 · software · GPL-3

Release Lineage

Entered 3.6 · Oct 31, 2017

Current · Requires R 4.6

1.0 In 18 of 49 releases 3.23

Description

This package is used for complex patient clustering by integrating multi-omic data through affinity network fusion.

Line coverage

Expression

Tests / Examples

Functions

6 6 exported

Complexity

7 avg / 18 max

Call network

6 nodes / 4 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

936

Files

56

Compiled share

0%

Has compiled src

No

Language breakdown

R 430 (45.9%)Tests 82 (8.8%)Docs 236 (25.2%)Vignettes 188 (20.1%)

API

Exported functions

6

Internal functions

0

Recent export changes

v3.6+6 ANF, affinity_matrix, eval_clu +3 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.19

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

18

First release

2017-10-30

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.6: 936 LOCv3.7: 936 LOCv3.8: 936 LOCv3.9: 936 LOCv3.10: 936 LOCv3.11: 936 LOCv3.12: 936 LOCv3.13: 936 LOCv3.14: 936 LOCv3.15: 936 LOCv3.16: 936 LOCv3.17: 936 LOCv3.18: 936 LOCv3.19: 936 LOCv3.20: 936 LOCv3.21: 936 LOCv3.22: 936 LOCv3.23: 936 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (1)

Bioconductor (1)

People

Tianle Ma