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regioneR

Bioc current

Association analysis of genomic regions based on permutation tests

v1.44.0 · software · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.1 · Apr 17, 2015

Current · Requires R 4.6

1.0 In 23 of 49 releases 3.23

Description

regioneR offers a statistical framework based on customizable permutation tests to assess the association between genomic region sets and other genomic features.

Code

Code metrics have not been computed for this package yet.

Topics

Software › ResearchField › Genetics
Software › Technology › Sequencing › ChIPSeq
Software › Technology › Sequencing › DNASeq
Software › Technology › Sequencing › MethylSeq
Software › AssayDomain › CopyNumberVariation

Depended on by (16)

Bioconductor (15)

annotatr ChIPpeakAnno CNVfilteR CNVRanger CopyNumberPlots EpiMix karyoploteR regioneReloaded UMI4Cats UPDhmm RgnTX CENTRE GXwasR RIPAT RLSeq

CRAN (1)

MitoHEAR

People

Bernat Gel