Skip to content

pairedGSEA

Bioc current

Paired DGE and DGS analysis for gene set enrichment analysis

v1.12.0 · software · MIT + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.17 · Apr 26, 2023

Current · Requires R 4.6

1.0 In 7 of 49 releases 3.23

Description

pairedGSEA makes it simple to run a paired Differential Gene Expression (DGE) and Differencital Gene Splicing (DGS) analysis. The package allows you to store intermediate results for further investiation, if desired. pairedGSEA comes with a wrapper function for running an Over-Representation Analysis (ORA) and functionalities for plotting the results.

Call graph

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Software › BiologicalQuestion › DifferentialExpression
Software › BiologicalQuestion › AlternativeSplicing
Software › BiologicalQuestion › DifferentialSplicing
Software › AssayDomain › GeneExpression
Software › ResearchField › Immunology › ImmunoOncology
Software › BiologicalQuestion › GeneSetEnrichment
Software › WorkflowStep › Pathways
Software › Technology › Sequencing › RNASeq
Software
Software › AssayDomain › Transcription

People