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motifmatchr

Bioc current

Fast Motif Matching in R

v1.34.0 · software · GPL-3 + file LICENSE
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Release Lineage

Entered 3.6 · Oct 31, 2017

Current · Requires R 4.6

1.0 In 18 of 49 releases 3.23

Description

Quickly find motif matches for many motifs and many sequences. Wraps C++ code from the MOODS motif calling library, which was developed by Pasi Rastas, Janne Korhonen, and Petri Martinmäki.

Code

Code metrics have not been computed for this package yet.

Topics

Software › BiologicalQuestion › MotifAnnotation

Depended on by (14)

Bioconductor (13)

ATACseqTFEA chromVAR enhancerHomologSearch epiregulon esATAC GRaNIE MethReg pageRank spatzie CAGEWorkflow ATACCoGAPS enrichTF looplook

CRAN (1)

Signac

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