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fcoex

Bioc removed

FCBF-based Co-Expression Networks for Single Cells

v1.16.0 · GPL-3

Release Lineage

Entered 3.10 · Oct 30, 2019

Removed after 3.18 · Oct 25, 2023

1.0 In 9 of 49 releases 3.23

Description

The fcoex package implements an easy-to use interface to co-expression analysis based on the FCBF (Fast Correlation-Based Filter) algorithm. it was implemented especifically to deal with single-cell data. The modules found can be used to redefine cell populations, unrevel novel gene associations and predict gene function by guilt-by-association. The package structure is adapted from the CEMiTool package, relying on visualizations and code designed and written by CEMiTool's authors.

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