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chromstaR

Bioc removed

Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data

v1.34.0 · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.4 · Oct 18, 2016

Removed after 3.21 · Apr 16, 2025

1.0 In 18 of 49 releases 3.23

Description

This package implements functions for combinatorial and differential analysis of ChIP-seq data. It includes uni- and multivariate peak-calling, export to genome browser viewable files, and functions for enrichment analyses.

Code

Code metrics have not been computed for this package yet.

Topics

Software › ResearchField › ImmunoOncology
Software
Software › BiologicalQuestion › DifferentialPeakCalling
Software › StatisticalMethod › HiddenMarkovModel
Software › Technology › Sequencing › ChIPSeq
Software › BiologicalQuestion › HistoneModification
Software › WorkflowStep › MultipleComparison
Software › Technology › Sequencing
Software › BiologicalQuestion › PeakDetection
Software › Technology › Sequencing › ATACSeq

People

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