Skip to content

TAPseq

Bioc current

Targeted scRNA-seq primer design for TAP-seq

v1.24.0 · software · MIT + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.11 · Apr 28, 2020

Current · Requires R 4.6

1.0 In 13 of 49 releases 3.23

Description

Design primers for targeted single-cell RNA-seq used by TAP-seq. Create sequence templates for target gene panels and design gene-specific primers using Primer3. Potential off-targets can be estimated with BLAST. Requires working installations of Primer3 and BLASTn.

Code & tests

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › SingleCell
Software › Technology › Sequencing
Software › Technology
Software › Technology › CRISPR
Software › Technology › Sequencing › PooledScreens

People