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NanoTube

Bioc current

An Easy Pipeline for NanoString nCounter Data Analysis

v1.18.0 · software · GPL-3 + file LICENSE
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Release Lineage

Entered 3.14 · Oct 27, 2021

Current · Requires R 4.6

1.0 In 10 of 49 releases 3.23

Description

NanoTube includes functions for the processing, quality control, analysis, and visualization of NanoString nCounter data. Analysis functions include differential analysis and gene set analysis methods, as well as postprocessing steps to help understand the results. Additional functions are included to enable interoperability with other Bioconductor NanoString data analysis packages.

Code & tests

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Topics

Software
Software › AssayDomain › GeneExpression
Software › BiologicalQuestion › DifferentialExpression
Software › WorkflowStep › QualityControl

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