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InPAS

Bioc current

Identify Novel Alternative PolyAdenylation Sites (PAS) from RNA-seq data

v2.20.0 · software · GPL (>= 2)
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Release Lineage

Entered 3.1 · Apr 17, 2015

Current · Requires R 4.6

1.0 In 23 of 49 releases 3.23

Description

Alternative polyadenylation (APA) is one of the important post- transcriptional regulation mechanisms which occurs in most human genes. InPAS facilitates the discovery of novel APA sites and the differential usage of APA sites from RNA-Seq data. It leverages cleanUpdTSeq to fine tune identified APA sites by removing false sites.

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Topics

Alternative Polyadenylation
Differential Polyadenylation Site Usage
RNA-seq
Gene Regulation
Software › AssayDomain › Transcription

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