VO

Valerie Obenchain

15 Bioconductor packages On CRAN since Oct 2008 (17 years) · last active 16 years ago On Bioconductor since May 2004 (22 years) · last active 9 months ago

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Bioconductor Packages

15 packages

Package	Title	Category	Version
AnVIL Bioc	Bioconductor on the AnVIL compute environment	software	1.24.0
BiocGenerics Bioc	S4 generic functions used in Bioconductor	software	0.58.1
BiocParallel Bioc	Bioconductor facilities for parallel evaluation	software	1.46.0
Biostrings Bioc	Efficient manipulation of biological strings	software	2.80.1
GenomicAlignments Bioc	Representation and manipulation of short genomic alignments	software	1.48.0
GenomicFiles Bioc	Distributed computing by file or by range	software	1.48.0
GenomicRanges Bioc	Representation and manipulation of genomic intervals	software	1.64.0
OrganismDbi Bioc	Software to enable the smooth interfacing of different database packages	software	1.54.0
Rsamtools Bioc	Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import	software	2.28.0
SummarizedExperiment Bioc	A container (S4 class) for matrix-like assays	software	1.42.0
annotation Bioc	Genomic Annotation Resources	workflows	1.36.0
cigarillo Bioc	Efficient manipulation of CIGAR strings	software	1.2.1
curatedMetagenomicData Bioc	Curated Metagenomic Data of the Human Microbiome	experiment	3.20.0
curatedTCGAData Bioc	Curated Data from The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects	experiment	1.34.0
variants Bioc	Annotating Genomic Variants	workflows	1.36.0