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bipartite

Visualising Bipartite Networks and Calculating Some (Ecological) Indices

v2.23 · Oct 7, 2025 · GPL
CRAN GitHub Mirror

Description

Functions to visualise webs and calculate a series of indices commonly used to describe pattern in (ecological) webs. It focuses on webs consisting of only two levels (bipartite), e.g. pollination webs or predator-prey-webs. Visualisation is important to get an idea of what we are actually looking at, while the indices summarise different aspects of the web's topology.

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CRAN Check Status

5 WARNING
9 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang WARNING
r-devel-linux-x86_64-debian-gcc WARNING
r-devel-linux-x86_64-fedora-clang WARNING
r-devel-linux-x86_64-fedora-gcc WARNING
r-devel-macos-arm64 OK
r-devel-windows-x86_64 WARNING
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
WARNING r-devel-linux-x86_64-debian-clang

whether package can be installed

Found the following significant warnings:
  ./MersenneTwister.h:307:13: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:74:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:78:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:310:18: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:311:17: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bipartite.Rcheck/00install.out’ for details.
* used C compiler: ‘Debian clang version 21.1.8 (3+b1)’
* used C++ compiler: ‘Debian clang version 21.1.8 (3+b1)’
WARNING r-devel-linux-x86_64-debian-gcc

whether package can be installed

Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bipartite.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc-15 (Debian 15.2.0-14) 15.2.0’
* used C++ compiler: ‘g++-15 (Debian 15.2.0-14) 15.2.0’
WARNING r-devel-linux-x86_64-fedora-clang

whether package can be installed

Found the following significant warnings:
  ./MersenneTwister.h:307:13: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:74:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:78:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:310:18: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:311:17: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
See ‘/data/gannet/ripley/R/packages/tests-clang/bipartite.Rcheck/00install.out’ for details.
* used C compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
* used C++ compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
WARNING r-devel-linux-x86_64-fedora-gcc

whether package can be installed

Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
See ‘/data/gannet/ripley/R/packages/tests-devel/bipartite.Rcheck/00install.out’ for details.
* used C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
* used C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’
OK r-devel-macos-arm64

*


            

            

              

                WARNING
                r-devel-windows-x86_64
              

              
whether package can be installed

              
Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types 'MTRand::<unnamed enum>' and 'MTRand::<unnamed enum>' is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types 'MTRand::<unnamed enum>' and 'MTRand::<unnamed enum>' is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration types 'MTRand::<unnamed enum>' and 'MTRand::<unnamed enum>' is deprecated [-Wdeprecated-enum-enum-conversion]
See 'd:/Rcompile/CRANpkg/local/4.6/bipartite.Rcheck/00install.out' for details.
* used C compiler: 'gcc.exe (GCC) 14.3.0'
* used C++ compiler: 'g++.exe (GCC) 14.3.0'

            

            

              

                OK
                r-oldrel-macos-arm64
              

              
*

              

            

            

              

                OK
                r-oldrel-macos-x86_64
              

              
*

              

            

            

              

                OK
                r-oldrel-windows-x86_64
              

              
*

              

            

            

              

                OK
                r-patched-linux-x86_64
              

              
*

              

            

            

              

                OK
                r-release-linux-x86_64
              

              
*

              

            

            

              

                OK
                r-release-macos-arm64
              

              
*

              

            

            

              

                OK
                r-release-macos-x86_64
              

              
*

              

            

            

              

                OK
                r-release-windows-x86_64
              

              
*

              

            

          

        

      



      

      
      

        
Check History

        

          

            
              WARNING
              
                9 OK ·                 0 NOTE ·                 5 WARNING ·                 0 ERROR ·                 0 FAILURE              
              Mar 9, 2026
            
            

              

                

                  WARNING
                  r-devel-linux-x86_64-debian-clang
                

                
whether package can be installed

                
Found the following significant warnings:
  ./MersenneTwister.h:307:13: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:74:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:78:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:310:18: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is depr

              

              

                

                  WARNING
                  r-devel-linux-x86_64-debian-gcc
                

                
whether package can be installed

                
Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration type

              

              

                

                  WARNING
                  r-devel-linux-x86_64-fedora-clang
                

                
whether package can be installed

                
Found the following significant warnings:
  ./MersenneTwister.h:307:13: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:74:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:78:2)') is deprecated [-Wdeprecated-anon-enum-enum-conversion]
  ./MersenneTwister.h:310:18: warning: arithmetic between different enumeration types ('MTRand::(unnamed enum at ./MersenneTwister.h:78:2)' and 'MTRand::(unnamed enum at ./MersenneTwister.h:74:2)') is depr

              

              

                

                  WARNING
                  r-devel-linux-x86_64-fedora-gcc
                

                
whether package can be installed

                
Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types ‘MTRand::<unnamed enum>’ and ‘MTRand::<unnamed enum>’ is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration type

              

              

                

                  WARNING
                  r-devel-windows-x86_64
                

                
whether package can be installed

                
Found the following significant warnings:
  MersenneTwister.h:307:20: warning: arithmetic between different enumeration types 'MTRand::<unnamed enum>' and 'MTRand::<unnamed enum>' is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:310:32: warning: arithmetic between different enumeration types 'MTRand::<unnamed enum>' and 'MTRand::<unnamed enum>' is deprecated [-Wdeprecated-enum-enum-conversion]
  MersenneTwister.h:311:24: warning: arithmetic between different enumeration type

              

            

          

        

      


      
      

        
Reverse Dependencies (15)

        

          
imports

          

            NIMAA
            PhageCocktail
            bioregion
            bootPLS
            cassandRa
            econetwork
            econullnetr
            nos
            plsRglm
            tapnet
          

        

        

          
suggests

          

            HiveR
            bipartiteD3
            leiden
            plsRbeta
            primer
          

        

      


      
      

        
Dependency Network

        

          
            

            
            
            Dependencies
            
            Reverse dependencies

            
            
            
            
            
            
            
            

            
            
            
            
            
            
            
            
            
            
            
            
            
            
            
            

            
            
              
              sna
            
            
              
              vegan
            
            
              
              corpcor
            
            
              
              fields
            
            
              
              igraph
            
            
              
              MASS
            
            
              
              permute
            

            
            
              
              NIMAA
            
            
              
              PhageCocktail
            
            
              
              bioregion
            
            
              
              bootPLS
            
            
              
              cassandRa
            
            
              
              econetwork
            
            
              
              econullnetr
            
            
              
              nos
            
            
              
              plsRglm
            
            
              
              tapnet
            
            
              
              HiveR
            
            
              
              bipartiteD3
            
            
              
              leiden
            
            
              
              plsRbeta
            
            
              
              primer
            

            
            
            bipartite
          
        

      


      
      

        
Version History

        

          

            new
            2.23
            Mar 9, 2026