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CohortCharacteristics

Summarise and Visualise Characteristics of Patients in the OMOP CDM

v1.1.1 · Jan 28, 2026 · Apache License (>= 2)

Description

Summarise and visualise the characteristics of patients in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model (CDM).

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CRAN Check Status

1 WARNING
2 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 WARNING
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (15 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb
WARNING r-oldrel-macos-x86_64

for code/documentation mismatches

Codoc mismatches from Rd file 'mockCohortCharacteristics.Rd':
mockCohortCharacteristics
  Code: function(con = NULL, writeSchema = NULL, numberIndividuals =
                 10, ..., seed = NULL)
  Docs: function(numberIndividuals = 10, ..., source = "local", con =
                 lifecycle::deprecated(), writeSchema =
                 lifecycle::deprecated(), seed =
                 lifecycle::deprecated())
  Argument names in docs not in code:
    source
  Mismatches in argument names (first 3):
    Position: 1 Code: con Docs: numberIndividuals
    Position: 2 Code: writeSchema Docs: ...
    Position: 3 Code: numberIndividuals Docs: source
  Mismatches in argument default values:
    Name: 'con' Code: NULL Docs: lifecycle::deprecated()
    Name: 'writeSchema' Code: NULL Docs: lifecycle::deprecated()
    Name: 'seed' Code: NULL Docs: lifecycle::deprecated()
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb
OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

WARNING 11 OK · 2 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb
WARNING r-oldrel-macos-x86_64

installed package size

  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  5.6Mb
  sub-directories of 1Mb or more:
    doc    3.6Mb
    help   1.8Mb

Reverse Dependencies (6)

Dependency Network

Dependencies Reverse dependencies CDMConnector dplyr tidyr rlang cli stringr omopgenerics PatientProfiles snakecase lifecycle purrr clock MeasurementDiagnostics PhenotypeR CohortConstructor OmopSketch OmopViewer visOmopResults CohortCharacteristics

Version History

new 1.1.1 Mar 9, 2026