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Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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846

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5

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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Showing 101–133 of 133 packages

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Package Status

CellScore Standard Cell Types Expression Dataset [hgu133plus2]

current

Example Data Package for CellScore

current

Access to SRT and snRNA-seq data from spatial_HPC project

current

Data for iModMix Package

current

Collection of publicly available imaging mass cytometry (IMC) datasets

current

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

current

RGLists from the Glas and Buyse breast cancer studies

current

Data used in the miRcomp package

current
msqc1 Bioc

Sigma mix MSQC1 data

current
muSpaData Bioc

Multi-sample multi-group spatially resolved transcriptomic data

current
muleaData Bioc

Genes Sets for Functional Enrichment Analysis with the 'mulea' R Package

current

Data Package for multiWGCNA

current
muscData Bioc

Multi-sample multi-group scRNA-seq data

current
nanotubes Bioc

Mouse nanotube CAGE data

current
octad.db Bioc

Open Cancer TherApeutic Discovery (OCTAD) database

current

Platform Design Info for Affymetrix Atdschip_tiling

current

Datasets and test data files for the plotgardener package

current
pumadata Bioc

Various data sets for use with the puma package

current
raerdata Bioc

A collection of datasets for use with raer package

current

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

current

Pre-processed data for use with the sampleClassifier package

current

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

current
scMultiome Bioc

Collection of Public Single-Cell Multiome (scATAC + scRNAseq) Datasets

current
scRNAseq Bioc

Collection of Public Single-Cell RNA-Seq Datasets

current
scpdata Bioc

Single-Cell Proteomics Data Package

current

Datasets for signatureSearch package

current

Provides access to smokingMouse project data

current

Spatial allelic expression counts for fly cross embryo

current

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

current
spqnData Bioc

Data for the spqn package

current

systemPipeRdata: Workflow templates and sample data

current

A data package for timecourse RNA-seq and microarray gene expression data sets

current

Tuberculosis Gene Expression Data for Machine Learning

current