Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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MicrobiomeData12

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Showing 1–12 of 12 packages

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Package	Category	Version	First Release	Last Release	Status
HMP16SData Bioc 16S rRNA Sequencing Data from the Human Microbiome Project	experiment	1.32.0	3.7	3.23	current
HMP2Data Bioc 16s rRNA sequencing data from the Human Microbiome Project 2	experiment	1.25.0	3.10	3.23	current
HoloFoodR Bioc R interface to EBI HoloFood resource	software	1.6.0	3.20	3.23	current
LegATo Bioc LegATo: Longitudinal mEtaGenomic Analysis Toolkit	experiment	1.6.0	3.20	3.23	current
MGnifyR Bioc R interface to EBI MGnify metagenomics resource	software	1.8.0	3.19	3.23	current
MetaScope Bioc Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data	experiment	2.0.0	3.17	3.23	current
MicrobiomeBenchmarkData Bioc Datasets for benchmarking in microbiome research	experiment	1.14.0	3.16	3.23	current
bugphyzz Bioc A harmonized data resource and software for enrichment analysis of microbial physiologies	experiment	1.6.0	3.20	3.23	current
curatedMetagenomicData Bioc Curated Metagenomic Data of the Human Microbiome	experiment	3.20.0	3.4	3.23	current
etec16s Bioc Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment	experiment	1.40.0	3.3	3.23	current
microbiomeDataSets Bioc Experiment Hub based microbiome datasets	experiment	1.20.0	3.13	3.23	current
msd16s Bioc Healthy and moderate to severe diarrhea 16S expression data	experiment	1.32.0	3.0	3.23	current