Bioconductor Packages

A Collection of Tumour Microenvironment Single-cell RNA Sequencing Datasets and Corresponding Metadata

Data for the VariantTools tutorial

Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples

Experimental dataset from the rat BodyMap project

Data for Combination Connectivity Mapping (ccmap) Package

Index of Reference Cell Type Datasets

Companion package to chipenrich

External data sets for clustifyr in ExperimentHub

Data used in the vignette of the cnvGSA package

Bladder Cancer Gene Expression Analysis

Curated breast cancer gene expression data with survival and treatment information

Colorectal Cancer Gene Expression Analysis

Curated Prostate Cancer Data

Cancer Dependency Map Data Package

An ExperimentHub Package for data sets with an Epithelial to Mesenchymal Transition (EMT)

The ewceData package provides reference data required for ewce

RNA-seq data with different levels of gDNA contamination

Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)

Sample data - Hapmap SNP 5.0 Affymetrix

Sample data - Hapmap SNP 6.0 Affymetrix

Dowloads A Gene Expression Dataset From GEO And Checks If It Contains Data Of Healthy Controls Or Not

CellScore Standard Cell Types Expression Dataset [hgu133plus2]

Example Data Package for CellScore

Access to SRT and snRNA-seq data from spatial_HPC project

Data for iModMix Package

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

RGLists from the Glas and Buyse breast cancer studies

Data used in the miRcomp package

Multi-sample multi-group spatially resolved transcriptomic data

Genes Sets for Functional Enrichment Analysis with the 'mulea' R Package

Data Package for multiWGCNA

Multi-sample multi-group scRNA-seq data

Mouse nanotube CAGE data

Open Cancer TherApeutic Discovery (OCTAD) database

Platform Design Info for Affymetrix Atdschip_tiling

Datasets and test data files for the plotgardener package

Various data sets for use with the puma package

A collection of datasets for use with raer package

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

Pre-processed data for use with the sampleClassifier package

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

Collection of Public Single-Cell Multiome (scATAC + scRNAseq) Datasets

Collection of Public Single-Cell RNA-Seq Datasets

Single-Cell Proteomics Data Package

Datasets for signatureSearch package

Provides access to smokingMouse project data

Spatial allelic expression counts for fly cross embryo

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

Data for the spqn package

A data package for timecourse RNA-seq and microarray gene expression data sets