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plaid

Bioc current

PLAID ultrafast gene set enrichment scoring

v1.0.0 · software · GPL-3
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Release Lineage

Entered 3.23 · Apr 29, 2026

Current · Requires R 4.6

1.0 In 1 of 49 releases 3.23

Description

PLAID (Pathway Level Average Intensity Detection) is an ultra-fast method to compute single-sample enrichment scores for gene expression or proteomics data. For each sample, plaid computes the gene set score as the average intensity of the genes/proteins in the gene set. The output is a gene set score matrix suitable for further analyses.

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Topics

Software › BiologicalQuestion › GeneSetEnrichment
Software › AssayDomain › GeneExpression
Software › ResearchField › Proteomics

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