gemma.R

Bioc current

A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses

v3.8.0 · software · Apache License (>= 2)

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Release Lineage

Entered 3.16 · Nov 2, 2022

Current · Requires R 4.6

1.0 In 8 of 49 releases 3.23

Description

Low- and high-level wrappers for Gemma's RESTful API. They enable access to curated expression and differential expression data from over 10,000 published studies. Gemma is a web site, database and a set of tools for the meta-analysis, re-use and sharing of genomics data, currently primarily targeted at the analysis of gene expression profiles.

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Topics

Software

Software › Infrastructure › DataImport

Software › Technology › Microarray

Software › Technology › SingleCell

ThirdPartyClient

Software › BiologicalQuestion › DifferentialExpression

Software › AssayDomain › GeneExpression

Software › StatisticalMethod › Bayesian

Software › WorkflowStep › Annotation

Software › WorkflowStep › ExperimentalDesign

Software › WorkflowStep › Normalization

Software › WorkflowStep › BatchEffect