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biomvRCNS

Bioc current

Copy Number study and Segmentation for multivariate biological data

v1.52.0 · software · GPL (>= 2)
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Release Lineage

Entered 2.12 · Apr 4, 2013

Current · Requires R 4.6

1.0 In 27 of 49 releases 3.23

Description

In this package, a Hidden Semi Markov Model (HSMM) and one homogeneous segmentation model are designed and implemented for segmentation genomic data, with the aim of assisting in transcripts detection using high throughput technology like RNA-seq or tiling array, and copy number analysis using aCGH or sequencing.

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Topics

Software › AssayDomain › aCGH
Software › AssayDomain › CopyNumberVariation
Software › Technology › Microarray
Software › Technology › Sequencing
Software › WorkflowStep › Visualization
Software › ResearchField › Genetics

People

Yang Du