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artMS

Bioc current

Analytical R tools for Mass Spectrometry

v1.29.0 · software · GPL (>= 3) + file LICENSE
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Release Lineage

Entered 3.8 · Oct 31, 2018

Current · Requires R 4.6

1.0 In 16 of 49 releases 3.23

Description

artMS provides a set of tools for the analysis of proteomics label-free datasets. It takes as input the MaxQuant search result output (evidence.txt file) and performs quality control, relative quantification using MSstats, downstream analysis and integration. artMS also provides a set of functions to re-format and make it compatible with other analytical tools, including, SAINTq, SAINTexpress, Phosfate, and PHOTON. Check [http://artms.org](http://artms.org) for details.

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Topics

Software › ResearchField › Proteomics
Software › BiologicalQuestion › DifferentialExpression
Software › ResearchField › BiomedicalInformatics
Software › ResearchField › SystemsBiology
Software › Technology › MassSpectrometry
Software › WorkflowStep › Annotation
Software › WorkflowStep › QualityControl
Software › BiologicalQuestion › GeneSetEnrichment
Software › StatisticalMethod › Clustering
Software › WorkflowStep › Normalization
Software › ResearchField › Immunology › ImmunoOncology
Software › WorkflowStep › MultipleComparison

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