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GenomicInteractionNodes

Bioc current

A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

v1.16.0 · software · file LICENSE
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Release Lineage

Entered 3.15 · Apr 27, 2022

Current · Requires R 4.6

1.0 In 9 of 49 releases 3.23

Description

The GenomicInteractionNodes package can import interactions from bedpe file and define the interaction nodes, the genomic interaction sites with multiple interaction loops. The interaction nodes is a binding platform regulates one or multiple genes. The detected interaction nodes will be annotated for downstream validation.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › Sequencing › HiC
Software › Technology › Sequencing
Software

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