GeneStructureTools
Bioc currentTools for spliced gene structure manipulation and analysis
Release Lineage
Entered 3.7 · May 1, 2018
Current · Requires R 4.6
Description
GeneStructureTools can be used to create in silico alternative splicing events, and analyse potential effects this has on functional gene products.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
38 36 exported
Complexity
7.2 avg / 19 max
Call network
38 nodes / 42 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
8,135
Files
88
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
36
Internal functions
2
Recent export changes
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
BSD_3_clause + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
17
First release
2018-04-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 0%
Topics
People
Beth Signal