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GSCA

Bioc current

GSCA: Gene Set Context Analysis

v2.42.0 · software · GPL(>=2)
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Release Lineage

Entered 2.14 · Apr 14, 2014

Current · Requires R 4.6

1.0 In 25 of 49 releases 3.23

Description

GSCA takes as input several lists of activated and repressed genes. GSCA then searches through a compendium of publicly available gene expression profiles for biological contexts that are enriched with a specified pattern of gene expression. GSCA provides both traditional R functions and interactive, user-friendly user interface.

Code & tests

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Code

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Topics

Software › AssayDomain › GeneExpression
Software › WorkflowStep › Visualization
Software › Infrastructure › GUI

People

Zhicheng Ji