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DELocal

Bioc current

Identifies differentially expressed genes with respect to other local genes

v1.12.0 · software · MIT + file LICENSE
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Release Lineage

Entered 3.17 · Apr 26, 2023

Current · Requires R 4.6

1.0 In 7 of 49 releases 3.23

Description

The goal of DELocal is to identify DE genes compared to their neighboring genes from the same chromosomal location. It has been shown that genes of related functions are generally very far from each other in the chromosome. DELocal utilzes this information to identify DE genes comparing with their neighbouring genes.

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Topics

Software › AssayDomain › GeneExpression
Software › BiologicalQuestion › DifferentialExpression
Software › Technology › Sequencing › RNASeq
Software › ResearchField › Transcriptomics

Depended on by (1)

Bioconductor (1)

broadSeq

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