Description
We provide a tidy grammar of population genetics, facilitating the manipulation and analysis of data on biallelic single nucleotide polymorphisms (SNPs). 'tidypopgen' scales to very large genetic datasets by storing genotypes on disk, and performing operations on them in chunks, without ever loading all data in memory. The full functionalities of the package are described in Carter et al. (2025) <doi:10.1111/2041-210x.70204>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (19 non-OK)
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r-devel-linux-x86_64-debian-clang
*
OK
r-devel-linux-x86_64-debian-gcc
*
OK
r-devel-linux-x86_64-fedora-clang
*
OK
r-devel-linux-x86_64-fedora-gcc
*
OK
r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
NOTE
r-oldrel-macos-arm64
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installed package size
installed size is 9.4Mb
sub-directories of 1Mb or more:
doc 1.8Mb
extdata 1.2Mb
libs 5.5Mb
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r-oldrel-macos-x86_64
installed package size
installed size is 9.2Mb
sub-directories of 1Mb or more:
doc 1.8Mb
extdata 1.2Mb
libs 5.3Mb
NOTE
r-oldrel-macos-x86_64
package dependencies
Packages suggested but not available for checking: 'admixtools', 'LEA'
NOTE
r-oldrel-windows-x86_64
installed package size
installed size is 5.4Mb
sub-directories of 1Mb or more:
doc 1.8Mb
extdata 1.1Mb
libs 1.6Mb
NOTE
r-oldrel-windows-x86_64
package dependencies
Package suggested but not available for checking: 'admixtools'
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
OK
r-release-macos-arm64
*
OK
r-release-macos-x86_64
*
OK
r-release-windows-x86_64
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NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-oldrel-macos-arm64
package dependencies
Packages suggested but not available for checking: 'admixtools', 'LEA'
NOTE
r-oldrel-macos-x86_64
package dependencies
Packages suggested but not available for checking: 'admixtools', 'LEA'
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r-oldrel-windows-x86_64
package dependencies
Package suggested but not available for checking: 'admixtools'
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Version History
new
0.4.3
Mar 9, 2026