rioja

1.0-7

Analysis of Quaternary Science Data

4packages depend

16.2Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Steve JugginsFirst published 2009-08-0826 releasesCRAN page ↗GitHub ↗

Constrained clustering, transfer functions, and other methods for analysing Quaternary science data.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("rioja", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("nsj3/rioja")

Development version from nsj3/rioja. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rioja

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-rioja

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-rioja

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.7 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 95%
Documented parameters: 74%
Return-value docs: 95%
References docs: 48%

Downloads

16.2K

CRAN downloads in the past year

Rank #3,605 · ~45/day · ~1.4K/mo

Releases R versions

Daily download trend is not available in this view yet.

82230 days

3.1K90 days

16.2K1 year

Compare downloads with other packages →

Also on422 r2u42 autocran3.9K conda_forge83 c2d4u

Repository

GitHub ↗ nsj3/rioja

12Stars

2Forks

0Open issues

0Open PRs

0Releases

84Commits

4Contributors

84 commits · Last activity 2024-09-09 · 0% stars, 30d

Stars over time

2023-10-06 · 102026-07-07 · 12

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/nsj3/rioja on 2026-07-19.

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5

Imports (4)

veganmgcvgrDevicesmethods

LinkingTo (0)

none

Suggests (1)

foreach

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

4direct

0indirect

palaeoSig tidypaleo adjclust betaStability

Code & Tests

Code Composition

C++ 4,055 (39%)R 3,570 (34%)Rd 2,033 (20%)C 712 (7%)

Code characteristics

Object systems

S380

Cyclomatic complexity: 3.0 median / 107 max

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

262 50 exported

Complexity

4.8 avg / 107 max

Call network

262 nodes / 181 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (1)

Maintainer (1)

Steve Juggins

Author, Maintainer · added in 1.0-7

Authors (1)

Steve Juggins

Author, Maintainer · added in 1.0-7

Package Timeline

26 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.0-7Latest
2024-09-26 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
1.0-6
2023-10-19 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.0-5
2022-10-31 · diff ↗
1.0-2
2022-10-25 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.9-26
2020-10-28 · diff ↗
R
R 4.0.0 released · 2020-04-24
archivedRemoved from CRAN
2019-09-04
no maintainer to correct further errors
R
R 3.6.0 released · 2019-04-26
unarchivedReturned to CRAN
2019-04-24
0.9-21
2019-04-23 · diff ↗

Show 34 earlier events

0.9-15.2
2019-03-08 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.9-15.1
2018-01-04 · diff ↗
orphanedOrphaned by its maintainer
2018-01-04
C++ errors were not corrected
0.9-15
2017-06-18 · diff ↗
0.9-14
2017-06-15 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.9-9
2016-07-13 · diff ↗
0.9-7
2016-05-24 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.9-6
2016-04-04 · diff ↗
0.9-5
2015-05-06 · diff ↗
R
R 3.2.0 released · 2015-04-16
0.9-3
2014-12-17 · diff ↗
0.8-7
2014-06-30 · diff ↗
R
R 3.1.0 released · 2014-04-10
0.8-5
2013-11-18 · diff ↗
0.8-4
2013-07-09 · diff ↗
0.8-3
2013-06-15 · diff ↗
R
R 3.0.0 released · 2013-04-03
R
R 2.15.0 released · 2012-03-30
0.7-3
2012-01-05 · diff ↗
0.7-2
2011-12-25 · diff ↗
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
R
R 2.11.0 released · 2010-04-22
0.5-6
2009-11-13 · diff ↗
0.5-5
2009-10-28 · diff ↗
0.5-4
2009-10-27 · diff ↗
R
R 2.10.0 released · 2009-10-26
0.5-3
2009-08-13 · diff ↗
0.5-2
2009-08-08
R
R 2.9.0 released · 2009-04-17

Package metadata

First published: 2009-08-08
Total releases: 26 / 17 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.5
Bundled data: 55 KB / 5 files
Download size: 144 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Analysis of Ecological and Environmental Data Paleontology

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