adiv

2.2.1

Analysis of Diversity

0packages depend

7.6Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Sandrine PavoineFirst published 2017-07-1912 releasesCRAN page ↗

Functions, data sets and examples for the calculation of various indices of biodiversity including species, functional and phylogenetic diversity. Part of the indices are expressed in terms of equivalent numbers of species. The package also provides ways to partition biodiversity across spatial or temporal scales (alpha, beta, gamma diversities). In addition to the quantification of biodiversity, ordination approaches are available which rely on diversity indices and allow the detailed identification of species, functional or phylogenetic differences between communities.

Install

R (CRAN)Ubuntu (r2u)openSUSE (OBS)

install.packages("adiv", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-adiv

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-adiv

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 6.3 min · r-devel-linux-x86_64-fedora-clang

Check history

NOTE2026-06-09
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

Documentation signals are not tracked yet for this package.

Downloads

7.6K

CRAN downloads in the past year

Rank #7,719 · ~21/day · ~637/mo

adiv Releases R versions

Daily download trend is not available in this view yet.

44530 days

1.4K90 days

7.6K1 year

Compare downloads with other packages →

Also on130 r2u54 autocran561 conda_forge88 c2d4u

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.0

Imports (13)

ade4 adegraphics apeclustergraphicsgrDeviceslpSolvemethodsphylobase phytools rglstatsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (1)

Sandrine Pavoine

no longer listed · 1.0 to 2.2.1

Package Timeline

12 releases. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2.2.1Latest
2024-02-19 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
2.2
2022-10-06 · diff ↗
2.1.2
2022-05-20 · diff ↗
R
R 4.2.0 released · 2022-04-22
2.1.1
2021-09-27 · diff ↗
2.1
2021-08-21 · diff ↗
R
R 4.1.0 released · 2021-05-18
2.0.1
2020-08-26 · diff ↗
R
R 4.0.0 released · 2020-04-24
2.0
2020-02-11 · diff ↗
1.4
2020-01-07 · diff ↗
1.3
2019-10-18 · diff ↗

Show 6 earlier events

R
R 3.6.0 released · 2019-04-26
1.2
2018-08-24 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1
2017-09-14 · diff ↗
1.0
2017-07-19
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-07-19
Total releases: 12 / 9 yrs
License: GPL (>= 2) OSI
Download size: 185 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Phylogenetics

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