R Observatory: Metrics for VSOLassoBag version 1.0

Balamuta, James Joseph

VSOLassoBag

1.0

Variable Selection Oriented LASSO Bagging Algorithm

0packages depend

2.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Chaoye WangFirst published 2022-11-253 releasesCRAN page ↗

A wrapped LASSO approach by integrating an ensemble learning strategy to help select efficient, stable, and high confidential variables from omics-based data. Using a bagging strategy in combination of a parametric method or inflection point search method for cut-off threshold determination. This package can integrate and vote variables generated from multiple LASSO models to determine the optimal candidates. Luo H, Zhao Q, et al (2020) doi:10.1126/scitranslmed.aax7533 for more details.

Install

BioconductorR (CRAN)Ubuntu (r2u)

BiocManager::install("VSOLassoBag")

Installs the current Bioconductor release. Requires the BiocManager package.

install.packages("VSOLassoBag", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-vsolassobag

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

Slowest check: 13.5 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

9

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-10
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 2 earlier snapshots

ERROR2026-05-03
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 40%

Downloads

2.5K

CRAN downloads in the past year

Rank #16,257 · ~7/day · ~212/mo

Releases R versions

Daily download trend is not available in this view yet.

13230 days

64190 days

2.5K1 year

Compare downloads with other packages →

Also on139 r2u

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.6.0

Imports (9)

glmnetsurvivalggplot2 POTparallelutilspbapplymethodsSummarizedExperiment

LinkingTo (0)

none

Suggests (4)

rmarkdown knitr rmdformats qpdf

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Chaoye Wang

Author, Maintainer

Authors (2)

Chaoye Wang

Author, Maintainer

Jiaqi Liang

Author

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0Latest
2025-09-01 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.99.1
2023-03-24 · diff ↗
0.99.0
2022-11-25
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-11-25
Total releases: 3 / 4 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.6.0
Bundled data: 764 KB / 1 file
Download size: 1.4 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Start here. This is the citation for the package itself.

citation("VSOLassoBag")

CRAN DOI

https://doi.org/10.32614/CRAN.package.VSOLassoBag

BibTeX, derived from DESCRIPTION

@Manual{VSOLassoBag,
  title  = {VSOLassoBag: Variable Selection Oriented LASSO Bagging Algorithm},
  author = {Wang, Chaoye and Liang, Jiaqi},
  year   = {2025},
  note   = {R package version 1.0},
  doi    = {10.32614/CRAN.package.VSOLassoBag},
  url    = {https://CRAN.R-project.org/package=VSOLassoBag}
}

Derived from the package DESCRIPTION, not from a citation file the authors wrote. If they publish one later, prefer it.

This is the citation for the package. It is not a citation for the R Observatory.

Cite this page

Use this when the claim is about a measurement on this page.

BibTeX

@misc{robservatoryVSOLassoBag,
  author    = {Balamuta, James Joseph},
  title     = {{R} {Observatory}: Metrics for {VSOLassoBag} version 1.0},
  year      = {2026},
  publisher = {HJJB, LLC},
  url       = {https://r-observatory.thecoatlessprofessor.com/packages/VSOLassoBag},
  note      = {Data set. Data release v2026-08-05}
}

APA

Balamuta, J. J. (2026). R Observatory: Metrics for VSOLassoBag version 1.0 [Data set]. HJJB, LLC. Data release v2026-08-05. https://r-observatory.thecoatlessprofessor.com/packages/VSOLassoBag

RIS

TY  - DATA
AU  - Balamuta, James Joseph
TI  - R Observatory: Metrics for VSOLassoBag version 1.0
PY  - 2026
PB  - HJJB, LLC
N1  - Data release v2026-08-05
UR  - https://r-observatory.thecoatlessprofessor.com/packages/VSOLassoBag
ER  -

In prose

These package metrics were obtained from the R Observatory (Balamuta, 2026), data release v2026-08-05, https://r-observatory.thecoatlessprofessor.com/packages/VSOLassoBag.

Bound to data release v2026-08-05, which is what makes the numbers on this page reproducible. See how to cite.

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