UCSCXenaShiny

Interactive Analysis of UCSC Xena Data

v2.2.0 · Jul 31, 2025 · GPL (>= 3)

Description

Provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.

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CRAN Check Status

3 NOTE

11 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	145.3s
r-devel-linux-x86_64-debian-gcc	OK	94.1s
r-devel-linux-x86_64-fedora-clang	OK	215.7s
r-devel-linux-x86_64-fedora-gcc	OK	222s
r-devel-macos-arm64	OK	45s
r-devel-windows-x86_64	OK	165s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	95s
r-oldrel-windows-x86_64	NOTE	402s
r-patched-linux-x86_64	OK	125.8s
r-release-linux-x86_64	OK	125.3s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	77s
r-release-windows-x86_64	OK	159s

Check details (14 non-OK)

OK r-devel-linux-x86_64-debian-clang

OK r-devel-linux-x86_64-debian-gcc

OK r-devel-linux-x86_64-fedora-clang

OK r-devel-linux-x86_64-fedora-gcc

OK r-devel-macos-arm64

OK r-devel-windows-x86_64

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  8.7Mb
  sub-directories of 1Mb or more:
    data       1.1Mb
    doc        1.3Mb
    shinyapp   5.6Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  8.6Mb
  sub-directories of 1Mb or more:
    data       1.1Mb
    doc        1.3Mb
    shinyapp   5.6Mb

NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  8.6Mb
  sub-directories of 1Mb or more:
    doc        1.3Mb
    shinyapp   5.6Mb

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

OK r-release-windows-x86_64

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026

NOTE r-oldrel-macos-arm64

installed package size

  installed size is  8.7Mb
  sub-directories of 1Mb or more:
    data       1.1Mb
    doc        1.3Mb
    shinyapp   5.6Mb

NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  8.6Mb
  sub-directories of 1Mb or more:
    data       1.1Mb
    doc        1.3Mb
    shinyapp   5.6Mb

NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  8.6Mb
  sub-directories of 1Mb or more:
    doc        1.3Mb
    shinyapp   5.6Mb

UCSCXenaShiny

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