RFLPtools

2.0

Tools to Analyse RFLP Data

0packages depend

2.7Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Matthias KohlFirst published 2010-02-1010 releasesCRAN page ↗

Provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis).

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("RFLPtools", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rflptools

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-RFLPtools

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-RFLPtools

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 2.2 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-05-14
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-30
9 OK · 2 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 98%
Return-value docs: 95%
References docs: 100%

Downloads

2.7K

CRAN downloads in the past year

Rank #17,456 · ~7/day · ~228/mo

Releases R versions

Daily download trend is not available in this view yet.

18430 days

66990 days

2.7K1 year

Compare downloads with other packages →

Also on103 r2u30 autocran662 conda_forge

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.0.0RColorBrewer

Imports (4)

statsutilsgraphicsgrDevices

LinkingTo (0)

none

Suggests (4)

knitr rmarkdownlatticeMKomics

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Matthias Kohl

Author, Maintainer

Authors (4)

Matthias Kohl

Author, Maintainer

Fabienne Flessa

Author

Mohammed Aslam Imtiaz

Author · added in 1.6

Alexandra Kehl

Author

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
2.0Latest
2022-02-08 · current release · diff ↗
R
R 4.1.0 released · 2021-05-18
1.9
2021-05-03 · diff ↗
1.8
2021-02-23 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
1.6
2014-08-14 · diff ↗

Show 14 earlier events

R
R 3.1.0 released · 2014-04-10
R
R 3.0.0 released · 2013-04-03
1.5
2013-01-04 · diff ↗
1.4
2012-10-26 · diff ↗
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
1.3
2010-07-24 · diff ↗
1.2
2010-06-10 · diff ↗
R
R 2.11.0 released · 2010-04-22
1.1
2010-03-11 · diff ↗
1.0
2010-02-10
R
R 2.10.0 released · 2009-10-26

Package metadata

First published: 2010-02-10
Total releases: 10 / 16 yrs
License: LGPL-3 OSI
Minimum R: ≥ 4.0.0
Bundled data: 31 KB / 5 files
Download size: 419 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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